class

Meru::Counter

Constructors

count_files(paths : Array(String), k : Int32) : Counter

count_files_parallel(paths : Array(String), k : Int32, threads : Int32, chunk_size : Int32 = 10000) : Counter

Worker-local counters. With Crystal multithreading enabled this can use CPU parallelism. Without it, the structure remains deterministic and easy to inspect.

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new(k : Int32)

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Instance methods

add_sequence(seq : String | IO::Memory)

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add_sequence_bytes(bytes : Bytes)

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counts

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merge!(other : Counter)

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total_bases

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total_bases=(total_bases : UInt64)

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total_reads

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total_reads=(total_reads : UInt64)

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valid_kmers

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valid_kmers=(valid_kmers : UInt64)

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