Meru::Config

new(k : Int32 = 21, output_prefix : String = "meru", threads : Int32 = 1, min_depth : Int32 = 1, max_depth : Int32 | Nil = nil, plot : Bool = true, input_paths : Array(String) = [] of String, hist_only : Bool = false, pair_min_depth : Int32 | Nil = nil, pair_max_depth : Int32 | Nil = nil, chunk_size : Int32 = 10000, log_scale : Bool = true, linear_smudge : Bool = false, plot_width : Int32 = 40, plot_height : Int32 = 30)

chunk_size=(chunk_size : Int32)

hist_only=(hist_only : Bool)

input_paths=(input_paths : Array(String))

k=(k : Int32)

linear_smudge=(linear_smudge : Bool)

log_scale=(log_scale : Bool)

max_depth=(max_depth : Int32 | Nil)

min_depth=(min_depth : Int32)

output_prefix=(output_prefix : String)

pair_max_depth=(pair_max_depth : Int32 | Nil)

pair_min_depth=(pair_min_depth : Int32 | Nil)

plot=(plot : Bool)

plot_height=(plot_height : Int32)

plot_width=(plot_width : Int32)

threads=(threads : Int32)