struct

Minimap2::MmSeed

Inherits Struct < Value < Object

Seed match (mirrors mm_seed_t, internal to mapping)

Constructors

new(n : Int32, q_pos : UInt32, q_span : UInt32, cr : Array(UInt64), seg_id : UInt32 = 0_u32, flt : Bool = false, is_tandem : Bool = false)
Source

Instance methods

cr

reference hits: array of (rid<<32|pos) packed into UInt64

Source
cr=(cr : Array(UInt64))

reference hits: array of (rid<<32|pos) packed into UInt64

Source
flt=(flt : Bool)
Source
flt?
Source
is_tandem=(is_tandem : Bool)
Source
is_tandem?
Source
n=(n : Int32)
Source
q_pos
Source
q_pos=(q_pos : UInt32)
Source
q_span
Source
q_span=(q_span : UInt32)
Source
seg_id
Source
seg_id=(seg_id : UInt32)
Source